2025-12-31 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY RCSB RCSB 2024-02-06 2025-12-31 2025-12-31 2025-12-31 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) R21-AI167756 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) U54-AI170856 United States HIV-1 R18L CA hexamer Schirra RT Pornillos O Ganser-Pornillos BK capsid, VIRUS LIKE PARTICLE Schirra RT Dos Santos NFB Ganser-Pornillos BK Pornillos O Arg18 Substitutions Reveal the Capacity of the HIV-1 Capsid Protein for Non-Fullerene Assembly. Viruses CH 16 2024 39066201 doi:10.3390/v16071038 1999-4915 8vxv FULLOVERLAP EMDB EMD-43641 associated EM volume
HIV-1 R18L CA hexamer
 PDB 8vxw unspecified
HIV-1 R18L CA pentamer
 HIV-1 CA R18L hexamer from capsid-like particles assembled in 1 M NaCl HIV-1 CA R18L hexamer from capsid-like particles assembled in 1 M NaCl 0 1 Human immunodeficiency virus 1 Capsid protein p24 Human immunodeficiency virus 1 0.025586391 1 Escherichia coli BL21(DE3) LEVO PIVQNLQGQMVHQAISPLTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEP FRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL P12497 singleParticle particle 8.0
50 mM Tris, pH 8, 1 M NaCl, 5 mM 2-mercaptoethanol
 ETHANE TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.0 2.5 GATAN K3 (6k x 4k) 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION
Ab initio
 C6 3.7 FSC 0.143 CUT-OFF cryoSPARC 737346 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_43641.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 308 308 308 0 0 0 308 308 308 211.288 211.288 211.288 90.0 90.0 90.0 X Y Z -0.28526703 0.4273357 0.0023587937 0.017700268 0.686 0.686 0.686 0.06 AUTHOR Main map 8ckv A PDB experimental model OTHER
Real-space refinement
REAL 249.0 emd_43641_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 308 308 308 0 0 0 308 308 308 211.288 211.288 211.288 90.0 90.0 90.0 X Y Z -0.047985077 0.12640658 0.0006393167 0.012649898 0.686 0.686 0.686 AUTHOR Half map emd_43641_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 308 308 308 0 0 0 308 308 308 211.288 211.288 211.288 90.0 90.0 90.0 X Y Z -0.060075674 0.12617792 0.00064164755 0.012645805 0.686 0.686 0.686 AUTHOR Half map