2026-02-18 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2025-02-04 2026-02-18 2026-02-18 2026-02-18 Biotechnology and Biological Sciences Research Council (BBSRC) United Kingdom Other private France GBSV1 portal protein without the N-terminal tail Chong PJ Chechik M Jenkins H Greive S Antson F GBSV1, Portal protein, Geobacillus phage GSBV1, VIRAL PROTEIN Chong PJ Chechik M Jenkins H Greive S Antson F GBSV1 portal protein without the N-terminal tail To Be Published 0353 9i8c FULLOVERLAP EMDB EMD-52713 associated EM volume
GBSV1 portal protein without the N-terminal tail
 GBSV1 portal protein GBSV1 portal protein 0 1
The N-terminal tail (M1-V40) was removed during cloning. The C-terminal end (E379-D406) could not be modelled, so has been omitted from the coordinate file.
Geobacillus phage GBSV1 Phage portal protein Geobacillus phage GBSV1 0.038272805 1 Escherichia coli LEVO RLSDNPEVRMAVHKIADLISSMTIYLMQNTEDGDIRIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKY TADGLIDELVPLTPSKVNFLDTPDGYQVLYGGQTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFM SGKYMPSLIVKVDAATAELSSEEGRNAVFKKYLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFG VPAFLLGIGEFNRDEYNNFINSTILPIAKGIEQELTRKLLISPDLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEV RDWLGLSPKEGLSELVIL Q0H263 singleParticle particle 1.3 8.0 50.0 Tris-HCL Tris 0.25 NaCl Sodium chloride UltrAuFoil R1.2/1.3 GOLD 300 ETHANE 100 277.15 FEI VITROBOT MARK IV
Blot time 1s, force -10, wait time 5s.
TFS GLACIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 200 1.2 2.0 240000.0 EPU FEI FALCON IV (4k x 4k) 1 4.81 50.0 1 973630 CTFFIND 4 PHASE FLIPPING AND AMPLITUDE CORRECTION C12 2.7 FSC 0.143 CUT-OFF RELION 4 21727 RANDOM ASSIGNMENT RELION 4 RANDOM ASSIGNMENT RELION 4 emd_52713.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 257.152 257.152 257.152 90.0 90.0 90.0 X Y Z -0.052286025 0.09395789 0.00019669706 0.004711101 1.0045 1.0045 1.0045 0.02 AUTHOR AlphaFold in silico model AB INITIO MODEL Coot 0.9.8.5 REAL emd_52713_msk_1.map emd_52713_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 257.152 257.152 257.152 90.0 90.0 90.0 X Y Z -0.027521953 0.040933643 0.00019688398 0.0027044455 1.0045 1.0045 1.0045 AUTHOR emd_52713_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 257.152 257.152 257.152 90.0 90.0 90.0 X Y Z -0.029538933 0.041981336 0.00019651011 0.0027240352 1.0045 1.0045 1.0045 AUTHOR