2026-03-25 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2025-03-14 2026-03-25 2026-03-25 2026-03-25 European Research Council (ERC) 951292 European Union Cryo-electron tomograms of Physcomitrium patens phyllids. Poege M Dickmanns M Xu P Li M Schioetz OH Kaiser COJ Ma J Bieber A Capitanio C Brenner JA Riggi M Miras M Kazemein Jasemi NS Schulze SX Simon R Frommer WB Plitzko JM Baumeister W Physcomitrium patens, Moss, PLANT PROTEIN Poege M Dickmanns M Xu P Li M Schioetz OH Kaiser COJ Ma J Bieber A Capitanio C Brenner JA Riggi M Miras M Kazemein Jasemi NS Schulze SX Simon R Frommer WB Plitzko JM Baumeister W Making plant tissue accessible for cryo-electron tomography To Be Published 0353 EMDB EMD-53142 associated EM volume Physcomitrium patens phyllids Physcomitrium patens phyllids 0 Physcomitrium patens Phyllid tomography tissue 5.7 NITROGEN
Tissue was high-pressure frozen as described in the publication and the corresponding protocol..
OTHER
The value given for _em_high_pressure_freezing.instrument is Leica EM ICE. This is not in a list of allowed values {'LEICA EM PACT2', 'EMS-002 RAPID IMMERSION FREEZER', 'BAL-TEC HPM 010', 'OTHER', 'LEICA EM PACT', 'LEICA EM HPM100'} so OTHER is written into the XML file.
 OTHER OTHER 30 0.05 10 90 800 300
The value given for _em_focused_ion_beam.instrument is TFS Scios/Aquilos. This is not in a list of allowed values {'DB235', 'OTHER'} so OTHER is written into the XML file.
 TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 5.5 6.5 42000.0 GIF Bioquantum 20 GATAN K2 SUMMIT (4k x 4k) 2.0 1 51 NONE emd_53142.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 928 928 464 0 0 0 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -62971.805000000000291 48928.504000000000815 354.069369999999992 688.703740000000039 14.08 14.08 14.08 AUTHOR This is the tomogram shown in the original publication. emd_53142_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 928 928 464 0 0 0 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -33648.069999999999709 30564.813999999998487 136.882839999999987 441.040070000000014 14.08 14.08 14.08 AUTHOR This is another tomogram example. emd_53142_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 928 928 464 0 0 0 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -52331.444999999999709 23245.069999999999709 237.24815000000001 465.426800000000014 14.08 14.08 14.08 AUTHOR This is another tomogram example.