2025-12-24 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2025-10-15 2025-10-22 2025-10-22 2025-12-24 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35GM130286 United States Swiss National Science Foundation Switzerland Tomogram of a mouse tracheal epithelial cell containing the C2CD3 luminal ring protein van den Hoek HG McCafferty C Righetto RD Stearns T Engel BD cilia, flagella, epithelium, transition zone, centriole, TRANSPORT PROTEIN, STRUCTURAL PROTEIN Bertiaux E Louvel V McCafferty CL van den Hoek H Batman U Mukherjee S Bournonville L Mercey O Mean I Righetto RD Muller A Van der Stappen P Buss G Daraspe J Genoud C Stearns T Engel BD Hamel V Guichard P The luminal ring protein C2CD3 acts as a radial in-to-out organizer of the distal centriole and appendages. Plos Biol. US 23 e3003519 e3003519 2025 41364719 doi:10.1371/journal.pbio.3003519 1545-7885 EMDB EMD-55386 associated EM volume Mouse epithelial tracheal cell Mouse epithelial tracheal cell 0 Mus musculus wild-type CD-1 or GFPcentrin2 transgenic mice Trachea Epithelium tomography cell 7.0 Quantifoil COPPER 200 CARBON GLOW DISCHARGE ETHANE-PROPANE LEICA EM GP OTHER OTHER 30 0.03 2700 91 13000 130
The value given for _em_focused_ion_beam.instrument is FEI Aquilos. This is not in a list of allowed values {'OTHER', 'DB235'} so OTHER is written into the XML file.
 TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.5 5.0 GATAN K2 SUMMIT (4k x 4k) COUNTING 2.0 1 BACK PROJECTION IMOD 59 IMOD PHASE FLIPPING ONLY emd_55386.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 928 928 464 0 0 -232 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -2091.416499999999814 1486.397200000000112 54.704666000000003 151.60408000000001 14.08 14.08 14.08 AUTHOR Raw tomogram reconstructed by filtered backprojection with IMOD. emd_55386_additional_1.map.gz 1 IMAGE STORED AS SIGNED BYTE 928 928 464 0 0 0 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -128.0 127.0 -0.9999202 10.003857999999999 14.08 14.08 14.08 AUTHOR Tomogram denoised by cryo-CARE. emd_55386_additional_2.map.gz 1 IMAGE STORED AS SIGNED BYTE 928 928 464 0 0 0 928 928 464 13066.24 13066.24 6533.12 90.0 90.0 90.0 X Y Z -128.0 127.0 -1.0000706 10.0039 14.08 14.08 14.08 AUTHOR Tomogram denoised by IsoNet on top of cryo-CARE.