2025-12-24 REL PDBc INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBj PDBc 2025-04-08 2025-12-24 2025-12-24 2025-12-24 National Natural Science Foundation of China (NSFC) 92469108 China Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2 Jin XH Sun L Spike and ACE2 complex, Viral protein/Hydrolase, VIRAL PROTEIN-HYDROLASE complex Shi J Zhao X Jin X Li J Liu Y Liu H Hu YF Chen Z Xiao Y Wang L Wang Y He Y Chai Y Hu B Shuai H Wang Y Li X Jiang S Zhang Y Zhang X Chan WM Chen LL Cai JP Sui B Zhang H Yang D Zhu L Yuan S Zhou J Huang JD Yuen KY To KK Chan JF Zhang BZ Wang Q He M Sun L Wang P Chu H Pathogenicity, virological features, and immune evasion of SARS-CoV-2 JN.1-derived variants including JN.1.7, KP.2, KP.3, and KP.3.1.1. Nat Commun UK 16 11002 11002 2025 41381428 doi:10.1038/s41467-025-66018-x 2041-1723 9ue6 FULLOVERLAP EMDB EMD-64077 associated EM volume
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
 KP.2 RBD in complex with ACE2 KP.2 RBD in complex with ACE2 0 1 2 Severe acute respiratory syndrome coronavirus 2 Spike protein S1 Severe acute respiratory syndrome coronavirus 2 0.022072916 1 Homo sapiens LEVO TNLCPFHEVFNATTFASVYAWNRTRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAP GQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKHSGNYDYWYRSLRKSKLKPFERDISTEIYQAGNKPCKGKGPNCYFPLQ SYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPK P0DTC2 Angiotensin-converting enzyme 2 Homo sapiens 0.072989047 1 Homo sapiens LEVO MSSSSWLLLSLVAVTAAQSTIEEQAKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENVQNMNNAGDKWSAFLKEQSTLA QMYPLQEIQNLTVKLQLQALQQNGSSVLSEDKSKRLNTILNTMSTIYSTGKVCNPDNPQECLLLEPGLNEIMANSLDYNE RLWAWESWRSEVGKQLRPLYEEYVVLKNEMARANHYEDYGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLYEHL HAYVRAKLMNAYPSYISPIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVSVGL PNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGF HEAVGEIMSLSAATPKHLKSIGLLSPDFQEDNETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEM KREIVGVVEPVPHDETYCDPASLFHVSNDYSFIRYYTRTLYQFQFQEALCQAAKHEGPLHKCDISNSTEAGQKLFNMLRL GKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQNKNSFVGWSTDWSPYADLEVLFQGPHHHHHHHH Q9BYF1 3.4.17.23 singleParticle particle 8.0 ETHANE TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.0 3.0 FEI FALCON IV (4k x 4k) 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION C1 2.9 FSC 0.143 CUT-OFF 393648 PROJECTION MATCHING PROJECTION MATCHING emd_64077.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 372.8 372.8 372.8 90.0 90.0 90.0 X Y Z -0.11135282 22.984268 -0.025836553 0.3544553 0.932 0.932 0.932 0.1 AUTHOR emd_64077_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 372.8 372.8 372.8 90.0 90.0 90.0 X Y Z -0.8171209 1.8405865 0.0007372559 0.06089496 0.932 0.932 0.932 AUTHOR emd_64077_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 372.8 372.8 372.8 90.0 90.0 90.0 X Y Z -0.7075423 1.698087 0.00072477636 0.06096493 0.932 0.932 0.932 AUTHOR